Disease: Alzheimer's Disease
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1799983
NOS3
0.430 0.880 7 150999023 missense variant T/A;G snv 0.75 246
rs5930
MIR6886 ; LDLR
0.827 0.200 19 11113589 synonymous variant A/G snv 0.63 0.66 8
rs5882
CETP
0.649 0.400 16 56982180 missense variant G/A;C snv 0.62 35
rs440446
APOE
0.807 0.200 19 44905910 missense variant C/G;T snv 0.60 8
rs1010159
SORL1
0.882 0.080 11 121612692 non coding transcript exon variant C/T snv 0.55 0.55 3
rs6332
NTF3
0.851 0.080 12 5494466 synonymous variant G/A;T snv 0.49; 3.2E-05 4
rs4680
COMT ; MIR4761
0.442 0.920 22 19963748 missense variant G/A snv 0.46 0.44 249
rs6313
HTR2A
0.562 0.640 13 46895805 synonymous variant G/A snv 0.41 0.40 82
rs3824968
SORL1
0.925 0.080 11 121605213 synonymous variant T/A snv 0.39 0.29 2
rs662
PON1
0.485 0.840 7 95308134 missense variant T/C snv 0.38 0.42 157
rs6330
NGF ; NGF-AS1
0.763 0.240 1 115286692 missense variant G/A snv 0.37 0.36 12
rs854560
PON1
0.513 0.800 7 95316772 missense variant A/C;G;N;T snv 0.29 113
rs7493
PON2
0.677 0.440 7 95405463 missense variant G/C snv 0.27 0.27 24
rs1805087
MTR
0.496 0.800 1 236885200 missense variant A/G snv 0.20 0.21 135
rs6265
BDNF ; BDNF-AS
0.436 0.760 11 27658369 missense variant C/T snv 0.19 0.15 272
rs1805054
HTR6
0.708 0.200 1 19666020 synonymous variant C/T snv 0.15; 8.0E-06 0.16 17
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 66
rs1801282
PPARG
0.500 0.840 3 12351626 missense variant C/G snv 0.11 8.9E-02 131
rs2298813
SORL1
0.790 0.120 11 121522975 missense variant G/A;T snv 7.2E-02; 4.0E-06 7
rs7412
APOE
0.641 0.640 19 44908822 missense variant C/T snv 6.2E-02 7.9E-02 47
rs2070600
AGER
0.561 0.760 6 32183666 missense variant C/T snv 5.3E-02 3.6E-02 82
rs17125721
PSEN1
0.763 0.120 14 73206470 missense variant A/G snv 1.5E-02 1.5E-02 14
rs75932628
LOC105375056 ; TREM2
0.662 0.480 6 41161514 missense variant C/A;T snv 6.8E-05; 2.6E-03 28
rs34637584
LRRK2
0.583 0.480 12 40340400 missense variant G/A snv 5.3E-04 3.6E-04 78
rs80356715
TARDBP
0.807 0.120 1 11016874 missense variant C/G;T snv 8.0E-06; 2.2E-04 6